Sample ID: Bac1_gyrB
[analysis description + link to github repo]
| Facility | Hogwarts |
| Analyst | John Doe |
| Analysis started | 2025-05-03 01:28:12 |
| Analysis completed | 2025-05-03 01:28:12 |
| Wall time | 0:0:0 hours |
Inconclusive
Outcome: The analyst should attempt subjective species identification at the genus level.
Reasoning: [Flag 1C] >3 candidate species matched with high stringency (identity ≥ 98.5%).
| Preliminary morphology ID confirmed? | NA |
|
Inconclusive taxonomic identity (Flag 1C) Bacteria. |
This Preliminary Morphology ID has been independently evaluated against the reference database to determine whether sufficient reference data exists to support identification of this taxon. Insufficient coverage can result in that taxon not be correctly identified as the taxonomic identity of the sample (type-II error).
For example, if your sample is from Homo sapiens, but there are no Homo sapiens DNA records in the reference database, the analysis will be unable to detect Homo sapiens as the correct taxonomic identity. In the latter case, the analysis will most likely try to assign the closest relative with existing reference data as the taxonomic identity.
No database coverage information is available for this taxon. This is likely because the data are insufficient or inappropriate for this analysis, or because an error was encountered during the analysis.
No taxa of interest provided at rank genus/species
| Locus | gyrB |
| Preliminary ID | Bacteria |
| Taxa of interest | |
| Country | Australia |
| Host | rockmelon (Cucumis melo var. cantalupensis) |
| Sample ID | Bac1_gyrB |
| Query DNA sequence |
>Bac1_gyrB GATGCGGTGGTAGCGCAGCTTGTCCACGTTGAAGTCGTCCGCGCCGCCCTTGCCGGTGCC GTCGGCGCTGGCCTTGCCGATGCCGGTGCCCAGGGCGGTGATGAGCGTGAGGATTTCGTT GGAGGTGAGCAGCTTCTCGTAGCGCGCCTTCTCCACGTTCAGGATCTTGCCGCGCAGCGG CAGGATGGCCTGGAACTTCCGGTCGCGGCCCTGCTTGGCGGAGCCGCCGGCGGAGTCGCC CTCGACGATGTAGATCTCGCTCAGGGCCGGGTCCTTCTCCTGGCAGTCGGCGAGCTTGCC GGGCAGGCCCATGCCGTCGAGCACGCCCTTGCGGCGCGTCATCTCGCGGGCCTTGCGCGC GGCCTCGCGGGCGCGGGCGGCTTCCACGATCTTGCCGCAGAGGATCTTGGCGTCGTTGGG GCGCTCTTCCAGGTAGTCGGTGAGGGCCTTGGCGACGATGTCTTCCACGGGCGCGCGCAC CTCGCTGGAGACGAGCTTGTCCTTGGTCTGGCTGCTGAACTTGGGCTCGGGCACCTTCAC GGAGAGCACGCAGCACAGGCCTTCGCGCATGTCGTCGCCGCTCACCTCGACCTTGGCCTT CTTGGCCAGCTCATTCTGCTCGATGTACTTGCCGATGACGCGCGTCATGGCGGCGCGCAG GCCGGTCAGGTGGGTGCCGCCGTCGCGCTGCGGGATGTTGTTGGTGAAGCAGAGCACGGA TTCGTTGAAGCCGTCGTTCCACTGCATGGCCACTTCCACGCCGATCTCGGTGCCGGGGAT GCCGCCGTAGGTCTCCGCGGGGCGGCTGCCCGTGGCGTGGAAGGCGTTGGGGTGCAACAC CTTCTTGCTGGCGTTGATGAACTGCACGAAGCCCATCACGCCGCCCGCGCCGGAGAAGTC GTCTTCCTTGCCGGTGCGCTCGTCCTTGAGGCGGATGCGCACGCCGTTGTTCAGGAACGA GAGCTCGCGCAGGCGCTTGGCGAGGATCTCGTAGTGGAAGTCGTTGTTCTCCTTGAAGAT CTCGGTGTCGGGCAGGAAGTGCACTTCGGTGCCGCGCTTGTCGGTTTCGCCGGTCACGCG CATGGGCGAGACCTCGACGCCGTTCACCGTCTCCAGGATGCGGTTCTGCACGAAGCCCTG GCTGAATTCCAGCAGGTGCACCTTGCCGTCGCGGCGCACGGTGAGGCGCAGCATCTTGCT GAGCGCGTTCACGCACGAGACGCCCACGCCGTGCAGGCCGCCCGAGACCTTGTAGCTGTT CTGGTC
Flag 1C:
The analyst should attempt subjective species identification at the genus level
>3 candidate species matched with high stringency (identity ≥ 98.5%)
Candidate hits must meet ONE of these criteria:
| Minimum alignment length |
400bp
|
| Minimum query coverage |
85.0%
|
Candidate hits have then been classified as follows:
| Classification | Alignment identity | Number of hits | Number of species |
|---|---|---|---|
| STRONG MATCH | ≥ 98.5% | 30 | 4 |
| MODERATE MATCH | ≥ 93.5% | NA | NA |
| NO MATCH | < 93.5% |
| Species | Hits | Identity | E-value | Database coverage |
|---|---|---|---|---|
| Paracidovorax citrulli | 19 | 100.0% | 0.0 |
Database coverage of Candidate Paracidovorax citrulliThis Candidate has been independently evaluated against the reference database to determine whether sufficient reference data exists to support identification of this taxon. Insufficient coverage can result in that taxon not be correctly identified as the taxonomic identity of the sample (type-II error). For example, if your sample is from Homo sapiens, but there are no Homo sapiens DNA records in the reference database, the analysis will be unable to detect Homo sapiens as the correct taxonomic identity. In the latter case, the analysis will most likely try to assign the closest relative with existing reference data as the taxonomic identity. No database coverage information is available for this taxon. This is because database coverage is not evaluated when there are zero or >3 candidate species. |
| Paracidovorax avenae | 9 | 98.8% | 0.0 |
Database coverage of Candidate Paracidovorax avenaeThis Candidate has been independently evaluated against the reference database to determine whether sufficient reference data exists to support identification of this taxon. Insufficient coverage can result in that taxon not be correctly identified as the taxonomic identity of the sample (type-II error). For example, if your sample is from Homo sapiens, but there are no Homo sapiens DNA records in the reference database, the analysis will be unable to detect Homo sapiens as the correct taxonomic identity. In the latter case, the analysis will most likely try to assign the closest relative with existing reference data as the taxonomic identity. No database coverage information is available for this taxon. This is because database coverage is not evaluated when there are zero or >3 candidate species. |
| Acidovorax sp. NCPPB 3859 | 1 | 98.5% | 0.0 |
Database coverage of Candidate Acidovorax sp. NCPPB 3859This Candidate has been independently evaluated against the reference database to determine whether sufficient reference data exists to support identification of this taxon. Insufficient coverage can result in that taxon not be correctly identified as the taxonomic identity of the sample (type-II error). For example, if your sample is from Homo sapiens, but there are no Homo sapiens DNA records in the reference database, the analysis will be unable to detect Homo sapiens as the correct taxonomic identity. In the latter case, the analysis will most likely try to assign the closest relative with existing reference data as the taxonomic identity. No database coverage information is available for this taxon. This is because database coverage is not evaluated when there are zero or >3 candidate species. |
| Acidovorax sp. GBBC 712 | 1 | 98.5% | 0.0 |
Database coverage of Candidate Acidovorax sp. GBBC 712This Candidate has been independently evaluated against the reference database to determine whether sufficient reference data exists to support identification of this taxon. Insufficient coverage can result in that taxon not be correctly identified as the taxonomic identity of the sample (type-II error). For example, if your sample is from Homo sapiens, but there are no Homo sapiens DNA records in the reference database, the analysis will be unable to detect Homo sapiens as the correct taxonomic identity. In the latter case, the analysis will most likely try to assign the closest relative with existing reference data as the taxonomic identity. No database coverage information is available for this taxon. This is because database coverage is not evaluated when there are zero or >3 candidate species. |
| # | Accession | Hit subject | Align length | Query coverage | Bitscore | E-value | Identity |
|---|---|---|---|---|---|---|---|
| 1 | CP029373 | Paracidovorax citrulli strain M6 chromosome, complete genome | 1265 | 99.9% | 2508.05 | 0.00e+00 | 100.0% |
| 2 | CP127364 | Paracidovorax citrulli strain KACC 17001 chromosome, complete genome | 1265 | 99.9% | 2508.05 | 0.00e+00 | 100.0% |
| 3 | CP086060 | Paracidovorax citrulli strain HPP21-9-4B chromosome, complete genome | 1265 | 99.9% | 2508.05 | 0.00e+00 | 100.0% |
| 4 | CP042303 | Paracidovorax citrulli strain NWB SC107 chromosome, complete genome | 1265 | 99.9% | 2508.05 | 0.00e+00 | 100.0% |
| 5 | GU385478 | Acidovorax citrulli strain ICMP 7500 DNA gyrase subunit beta (gyrB) gene, partial cds | 1265 | 99.9% | 2508.05 | 0.00e+00 | 100.0% |
| 6 | CP042323 | Paracidovorax citrulli strain NWB SC196 chromosome, complete genome | 1265 | 99.9% | 2508.05 | 0.00e+00 | 100.0% |
| 7 | CP086023 | Paracidovorax citrulli strain HPP21-3-3B chromosome, complete genome | 1265 | 99.9% | 2508.05 | 0.00e+00 | 100.0% |
| 8 | KU984117 | Paracidovorax citrulli strain AAC_213-50 DNA gyrase subunit beta (gyrB) gene, partial cds | 355 | 28.0% | 704.195 | 0.00e+00 | 100.0% |
| 9 | CP127363 | Paracidovorax citrulli strain KACC 17005 chromosome, complete genome | 1265 | 99.9% | 2460.48 | 0.00e+00 | 99.5% |
| 10 | CP127362 | Paracidovorax citrulli strain KACC 17913 chromosome, complete genome | 1265 | 99.9% | 2460.48 | 0.00e+00 | 99.5% |
| 11 | CP133289 | Paracidovorax citrulli strain YDAC2 chromosome, complete genome | 1265 | 99.9% | 2460.48 | 0.00e+00 | 99.5% |
| 12 | CP023687 | Paracidovorax citrulli strain KACC17005 chromosome, complete genome | 1265 | 99.9% | 2460.48 | 0.00e+00 | 99.5% |
| 13 | CP000512 | Acidovorax citrulli AAC00-1, complete genome | 1265 | 99.9% | 2460.48 | 0.00e+00 | 99.5% |
| 14 | CP127360 | Paracidovorax citrulli strain KACC 18784 chromosome, complete genome | 1265 | 99.9% | 2460.48 | 0.00e+00 | 99.5% |
| 15 | CP127361 | Paracidovorax citrulli strain KACC 18782 chromosome, complete genome | 1265 | 99.9% | 2460.48 | 0.00e+00 | 99.5% |
| 16 | CP042302 | Paracidovorax citrulli strain NWB SC074 chromosome, complete genome | 1265 | 99.9% | 2460.48 | 0.00e+00 | 99.5% |
| 17 | MT912472 | Paracidovorax citrulli strain HMU50556 DNA gyrase subunit beta (gyrB) gene, partial cds | 879 | 69.4% | 1711.19 | 0.00e+00 | 99.5% |
| 18 | GU256249 | Acidovorax citrulli strain 3b DNA gyrase subunit beta (gyrB) gene, partial cds | 1265 | 99.9% | 2452.55 | 0.00e+00 | 99.4% |
| 19 | GU385476 | Acidovorax citrulli strain 3 DNA gyrase subunit beta (gyrB) gene, partial cds | 1265 | 99.9% | 2444.62 | 0.00e+00 | 99.4% |
| 20 | KU984110 | Paracidovorax citrulli strain AAC_213-41 DNA gyrase subunit beta (gyrB) gene, partial cds | 355 | 28.0% | 688.337 | 0.00e+00 | 99.4% |
| 21 | GU385477 | Acidovorax citrulli strain A7 DNA gyrase subunit beta (gyrB) gene, partial cds | 1265 | 99.9% | 2418.85 | 0.00e+00 | 99.1% |
| 22 | CP156079 | Paracidovorax avenae strain CNGX08 chromosome, complete genome | 1265 | 99.9% | 2453.0445 | 0.00e+00 | 98.8% |
| 23 | CP028302 | Paracidovorax avenae isolate SF12 chromosome | 1265 | 99.9% | 2429.2545 | 0.00e+00 | 98.6% |
| 24 | CP028292 | Paracidovorax avenae strain INDB2 chromosome | 1265 | 99.9% | 2429.2545 | 0.00e+00 | 98.6% |
| 25 | CP097266 | Acidovorax sp. NCPPB 3859 chromosome, complete genome | 1265 | 99.9% | 2421.3245 | 0.00e+00 | 98.5% |
| 26 | CP028301 | Paracidovorax avenae strain Sa2 chromosome | 1265 | 99.9% | 2421.3245 | 0.00e+00 | 98.5% |
| 27 | CP097265 | Acidovorax sp. GBBC 712 chromosome, complete genome | 1265 | 99.9% | 2421.3245 | 0.00e+00 | 98.5% |
| 28 | GU385481 | Acidovorax avenae strain ICMP 3183 DNA gyrase subunit beta (gyrB) gene, partial cds | 1265 | 99.9% | 2357.4 | 0.00e+00 | 98.5% |
| 29 | CP028291 | Paracidovorax avenae strain COLB1 chromosome | 1265 | 99.9% | 2421.3245 | 0.00e+00 | 98.5% |
| 30 | CP028297 | Paracidovorax avenae strain MOR chromosome | 1265 | 99.9% | 2421.3245 | 0.00e+00 | 98.5% |
| 31 | CP002521 | Acidovorax avenae subsp. avenae ATCC 19860, complete genome | 1265 | 99.9% | 2421.3245 | 0.00e+00 | 98.5% |
| 32 | CP028289 | Paracidovorax avenae strain AA99_2 chromosome | 1265 | 99.9% | 2413.3945 | 0.00e+00 | 98.5% |
| 33 | CP028299 | Paracidovorax avenae strain QH1 chromosome | 1265 | 99.9% | 2405.4645 | 0.00e+00 | 98.4% |
| 34 | AP035783 | Acidovorax sacchari HC-19 DNA, complete genome | 1265 | 99.9% | 2405.4645 | 0.00e+00 | 98.4% |
| 35 | AP035784 | Acidovorax sacchari HC-21 DNA, complete genome | 1265 | 99.9% | 2405.4645 | 0.00e+00 | 98.4% |
| 36 | CP028295 | Paracidovorax avenae strain MD5 chromosome | 1265 | 99.9% | 2405.4645 | 0.00e+00 | 98.4% |
| 37 | CP028303 | Paracidovorax avenae strain SH7 chromosome | 1265 | 99.9% | 2405.4645 | 0.00e+00 | 98.4% |
| 38 | CP028288 | Paracidovorax avenae strain AA81_1 chromosome | 1265 | 99.9% | 2333.62 | 0.00e+00 | 98.3% |
| 39 | CP028287 | Paracidovorax avenae strain AA78_5 chromosome | 1265 | 99.9% | 2373.7545 | 0.00e+00 | 98.1% |
| 40 | KP057799 | Acidovorax oryzae strain A2 gyrase (gyrB) gene, partial cds | 316 | 25.0% | 579.313 | 4.29e-160 | 98.1% |
| 41 | GU385479 | Acidovorax cattleyae strain ICMP 2826 DNA gyrase subunit beta (gyrB) gene, partial cds | 1265 | 99.9% | 2293.97 | 0.00e+00 | 97.9% |
| 42 | CP028290 | Paracidovorax cattleyae strain CAT98_1 chromosome | 1265 | 99.9% | 2357.8945 | 0.00e+00 | 97.9% |
| 43 | KP057798 | Acidovorax oryzae strain 35 gyrase (gyrB) gene, partial cds | 316 | 25.0% | 555.526 | 6.22e-153 | 97.2% |
| 44 | KP057800 | Acidovorax oryzae strain 7 gyrase (gyrB) gene, partial cds | 315 | 24.9% | 545.614 | 5.99e-150 | 96.8% |
| 45 | EU024197 | Acidovorax avenae subsp. avenae strain CIP 106500 DNA gyrase subunit beta (gyrB) gene, partial cds | 317 | 25.0% | 533.721 | 2.28e-146 | 96.2% |
| 46 | CP028298 | Paracidovorax avenae strain NCT3 chromosome | 1265 | 99.9% | 2151.7445000000002 | 0.00e+00 | 95.9% |
| 47 | CP028296 | Paracidovorax avenae strain MDB1 chromosome | 1265 | 99.9% | 2151.7445000000002 | 0.00e+00 | 95.9% |
| 48 | CP028300 | Paracidovorax avenae strain QHB1 chromosome | 1265 | 99.9% | 2151.7445000000002 | 0.00e+00 | 95.9% |
| 49 | CP028294 | Paracidovorax avenae strain KL3 chromosome | 1265 | 99.9% | 2112.0945 | 0.00e+00 | 95.5% |
| 50 | GU385480 | Acidovorax konjaci strain ICMP 7733 DNA gyrase subunit beta (gyrB) gene, partial cds | 1265 | 99.9% | 1960.95 | 0.00e+00 | 94.5% |
| 51 | LC669834 | Acidovorax sp. SUPP 950 gyrB gene for DNA gyrase subunit B, partial cds | 978 | 77.3% | 1344.47 | 0.00e+00 | 92.4% |
| 52 | LC669845 | Acidovorax sp. SUPP 3434 gyrB gene for DNA gyrase subunit B, partial cds | 978 | 77.3% | 1328.61 | 0.00e+00 | 92.2% |
| 53 | LC669843 | Acidovorax sp. SUPP 2825 gyrB gene for DNA gyrase subunit B, partial cds | 978 | 77.3% | 1328.61 | 0.00e+00 | 92.2% |
| 54 | LC669837 | Acidovorax sp. SUPP 1862 gyrB gene for DNA gyrase subunit B, partial cds | 978 | 77.3% | 1328.61 | 0.00e+00 | 92.2% |
| 55 | LC669835 | Acidovorax sp. SUPP 952 gyrB gene for DNA gyrase subunit B, partial cds | 978 | 77.3% | 1328.61 | 0.00e+00 | 92.2% |
| 56 | LC669847 | Acidovorax sp. SUPP 3334 gyrB gene for DNA gyrase subunit B, partial cds | 978 | 77.3% | 1328.61 | 0.00e+00 | 92.2% |
| 57 | LC669836 | Acidovorax sp. SUPP 1855 gyrB gene for DNA gyrase subunit B, partial cds | 978 | 77.3% | 1320.68 | 0.00e+00 | 92.0% |
| 58 | LC669840 | Acidovorax sp. SUPP 2539 gyrB gene for DNA gyrase subunit B, partial cds | 978 | 77.3% | 1320.68 | 0.00e+00 | 92.0% |
| 59 | LC669846 | Acidovorax sp. SUPP 3458 gyrB gene for DNA gyrase subunit B, partial cds | 978 | 77.3% | 1296.89 | 0.00e+00 | 91.7% |
| 60 | LC669844 | Acidovorax sp. SUPP 3433 gyrB gene for DNA gyrase subunit B, partial cds | 978 | 77.3% | 1296.89 | 0.00e+00 | 91.7% |
| 61 | LC669839 | Acidovorax sp. SUPP 2613 gyrB gene for DNA gyrase subunit B, partial cds | 978 | 77.3% | 1288.96 | 0.00e+00 | 91.6% |
| 62 | LC669838 | Acidovorax sp. SUPP 2522 gyrB gene for DNA gyrase subunit B, partial cds | 978 | 77.3% | 1288.96 | 0.00e+00 | 91.6% |
| 63 | LC669842 | Acidovorax sp. SUPP 3383 gyrB gene for DNA gyrase subunit B, partial cds | 978 | 77.3% | 1288.96 | 0.00e+00 | 91.6% |
| 64 | LC669841 | Acidovorax sp. SUPP 3272 gyrB gene for DNA gyrase subunit B, partial cds | 975 | 77.0% | 1283.02 | 0.00e+00 | 91.6% |
| 65 | CP097269 | Acidovorax sp. GBBC 1281 chromosome, complete genome | 1265 | 99.9% | 1793.4394 | 0.00e+00 | 91.5% |
| 66 | CP136797 | Acidovorax sp. BLS4 chromosome, complete genome | 1265 | 99.9% | 1841.0194 | 0.00e+00 | 91.2% |
| 67 | GQ980291 | Caulobacter leidyia clone 2 DNA gyrase subunit B-like (gyrB) gene, partial sequence | 511 | 40.4% | 656.621 | 0.00e+00 | 91.2% |
| 68 | LR813084 | Delftia tsuruhatensis isolate BB1455 genome assembly, chromosome: BB1455_hybrid | 1171 | 92.5% | 1509.9835 | 0.00e+00 | 90.9% |
| 69 | CP022656 | Delftia acidovorans strain RAY209 genome | 1164 | 91.9% | 1448.032 | 0.00e+00 | 90.7% |
| 70 | AB021442 | Bacterium rM9 gyrB gene for subunit B protein of DNA gyrase, partial cds | 674 | 53.2% | 837.007 | 0.00e+00 | 90.7% |
| 71 | CP017311 | Hydrogenophaga sp. PBC chromosome, complete genome | 1095 | 86.5% | 1446.5461 | 0.00e+00 | 90.4% |
| 72 | CP120956 | Delftia tsuruhatensis strain Ery-6A chromosome, complete genome | 1168 | 92.3% | 1416.322 | 0.00e+00 | 90.3% |
| 73 | CP097267 | Acidovorax sp. NCPPB 3576 chromosome, complete genome | 1265 | 99.9% | 1689.8758 | 0.00e+00 | 90.2% |
| 74 | CP060790 | Paenacidovorax monticola strain KACC 19171 chromosome, complete genome | 1265 | 99.9% | 1520.89 | 0.00e+00 | 90.2% |
| 75 | AP024172 | Alicycliphilus denitrificans I51 DNA, complete genome | 1265 | 99.9% | 1557.0654 | 0.00e+00 | 90.2% |
| 76 | CP181370 | Alicycliphilus denitrificans strain A12 chromosome, complete genome | 1265 | 99.9% | 1516.92 | 0.00e+00 | 90.1% |
| 77 | CP002449 | Alicycliphilus denitrificans BC, complete genome | 1265 | 99.9% | 1640.8044 | 0.00e+00 | 90.1% |
| 78 | CP051298 | Alicycliphilus denitrificans strain DP3 chromosome, complete genome | 1265 | 99.9% | 1640.8044 | 0.00e+00 | 90.1% |
| 79 | CP002657 | Alicycliphilus denitrificans K601, complete genome | 1265 | 99.9% | 1632.8744 | 0.00e+00 | 90.0% |
| 80 | CP053915 | Acidovorax sp. YS12 chromosome, complete genome | 1265 | 99.9% | 1481.24 | 0.00e+00 | 89.8% |
| 81 | CP115182 | Diaphorobacter sp. ED-3 chromosome, complete genome | 1265 | 99.9% | 1563.0049 | 0.00e+00 | 89.7% |
| 82 | CP016278 | Diaphorobacter nitroreducens strain SL-205 chromosome, complete genome | 1265 | 99.9% | 1473.31 | 0.00e+00 | 89.7% |
| 83 | CP049905 | Diaphorobacter sp. HDW4B chromosome, complete genome | 1064 | 84.0% | 1237.9199999999998 | 0.00e+00 | 89.7% |
| 84 | AB021437 | Bacterium rM3 gyrB gene for subunit B protein of DNA gyrase, partial cds | 629 | 49.7% | 732.439 | 3.45e-206 | 89.7% |
| 85 | AB021450 | Bacterium rA1 gyrB gene for subunit B protein of DNA gyrase, partial cds | 629 | 49.7% | 732.439 | 3.45e-206 | 89.7% |
| 86 | CP126238 | Alicycliphilus denitrificans strain Ylb10 chromosome, complete genome | 1200 | 94.8% | 1420.2854 | 0.00e+00 | 89.6% |
| 87 | CP139793 | Hydrogenophaga sp. SNF1 chromosome, complete genome | 1187 | 93.8% | 1468.3509 | 0.00e+00 | 89.6% |
| 88 | AB014985 | Comamonas sp. E6 gyrB gene for DNA gyrase subunit B, partial cds, clone: gy10391.icb | 664 | 52.4% | 769.61 | 0.00e+00 | 89.6% |
| 89 | CP152342 | Acidovorax sp. SDU_ACID1 chromosome, complete genome | 1265 | 99.9% | 1487.6822 | 0.00e+00 | 89.5% |
| 90 | AB021444 | Bacterium rM11 gyrB gene for subunit B protein of DNA gyrase, partial cds | 574 | 45.3% | 663.06 | 2.65e-185 | 89.5% |
| 91 | CP044972 | Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B4) chromosome, complete genome | 704 | 55.6% | 801.326 | 0.00e+00 | 89.4% |
| 92 | CP044975 | Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) chromosome, complete genome | 704 | 55.6% | 801.326 | 0.00e+00 | 89.4% |
| 93 | CP080761 | Diaphorobacter sp. MNS-0 chromosome, complete genome | 1265 | 99.9% | 1523.3648999999998 | 0.00e+00 | 89.3% |
| 94 | CP135236 | Delftia tsuruhatensis strain HA60 chromosome, complete genome | 1197 | 94.5% | 1358.34 | 0.00e+00 | 89.3% |
| 95 | CP118775 | Delftia tsuruhatensis strain ULwDis3 chromosome, complete genome | 1197 | 94.5% | 1358.34 | 0.00e+00 | 89.3% |
| 96 | CP060714 | Diaphorobacter ruginosibacter strain DSM 27467 chromosome, complete genome | 1129 | 89.2% | 1275.579 | 0.00e+00 | 89.3% |
| 97 | CP088081 | Ideonella dechloratans strain CCUG 30977 chromosome, complete genome | 693 | 54.7% | 871.1980000000001 | 5.84e-248 | 89.3% |
| 98 | CP123228 | Piscinibacter sp. XHJ-5 chromosome, complete genome | 685 | 54.1% | 779.521 | 0.00e+00 | 89.3% |
| 99 | CP180191 | Piscinibacterium candidicorallinum strain LMG 29480 chromosome, complete genome | 635 | 50.2% | 720.054 | 0.00e+00 | 89.3% |
| 100 | CP000539 | Acidovorax sp. JS42, complete genome | 1265 | 99.9% | 1515.4349 | 0.00e+00 | 89.2% |
| 101 | HQ588350 | Diaphorobacter sp. QH-6 DNA gyrase subunit beta (gyrB) gene, partial cds | 1235 | 97.6% | 1390.06 | 0.00e+00 | 89.2% |
| 102 | CP152407 | Acidovorax sp. FHTAMBA chromosome, complete genome | 1195 | 94.4% | 1346.45 | 0.00e+00 | 89.2% |
| 103 | AP028672 | Acidovorax sp. A79 DNA, complete genome | 1196 | 94.5% | 1470.3293 | 0.00e+00 | 89.2% |
| 104 | CP049989 | Hydrogenophaga crocea strain BA0156 chromosome, complete genome | 1187 | 93.8% | 1454.9673 | 0.00e+00 | 89.2% |
| 105 | MK843366 | Uncultured bacterium clone contig045 genomic sequence | 972 | 76.8% | 1091.228 | 0.00e+00 | 89.2% |
| 106 | AB021436 | Bacterium rM2 gyrB gene for subunit B protein of DNA gyrase, partial cds | 630 | 49.8% | 710.634 | 1.26e-199 | 89.2% |
| 107 | CP152408 | Xylophilus sp. GW821-FHT01B05 chromosome, complete genome | 1265 | 99.9% | 1491.6439 | 0.00e+00 | 89.1% |
| 108 | CP065668 | Delftia acidovorans strain FDAARGOS_909 chromosome, complete genome | 1265 | 99.9% | 1442.0845000000002 | 0.00e+00 | 89.1% |
| 109 | CP160388 | Oryzisolibacter sp. LB2S chromosome, complete genome | 1265 | 99.9% | 1495.6077 | 0.00e+00 | 89.0% |
| 110 | CP001392 | Acidovorax ebreus TPSY, complete genome | 1265 | 99.9% | 1483.7149 | 0.00e+00 | 89.0% |
| 111 | CP065406 | Diaphorobacter sp. JS3051 chromosome, complete genome | 1265 | 99.9% | 1483.7149 | 0.00e+00 | 89.0% |
| 112 | AB002237 | Pseudomonas sp. gene for subunit B protein of DNA gyrase, partial cds | 756 | 59.7% | 835.025 | 0.00e+00 | 88.9% |
| 113 | CP058970 | Delftia acidovorans strain B804 chromosome, complete genome | 1265 | 99.9% | 1418.3045000000002 | 0.00e+00 | 88.8% |
| 114 | CP182417 | Delftia tsuruhatensis strain Dt1S33 chromosome, complete genome | 1265 | 99.9% | 1370.24 | 0.00e+00 | 88.7% |
| 115 | CP017420 | Delftia tsuruhatensis strain CM13 chromosome, complete genome | 1265 | 99.9% | 1370.24 | 0.00e+00 | 88.7% |
| 116 | CP104581 | Delftia tsuruhatensis strain GD03927 chromosome, complete genome | 1265 | 99.9% | 1370.24 | 0.00e+00 | 88.7% |
| 117 | CP065748 | Delftia lacustris strain FDAARGOS_890 chromosome, complete genome | 1265 | 99.9% | 1370.24 | 0.00e+00 | 88.7% |
| 118 | CP157763 | Delftia sp. DS1230 chromosome, complete genome | 1265 | 99.9% | 1370.24 | 0.00e+00 | 88.7% |
| 119 | CP002735 | Delftia sp. Cs1-4, complete genome | 1265 | 99.9% | 1402.4445 | 0.00e+00 | 88.7% |
| 120 | CP069318 | Delftia lacustris strain R54 chromosome, complete genome | 1197 | 94.5% | 1302.84 | 0.00e+00 | 88.7% |
| 121 | CP054840 | Comamonas antarctica strain 16-35-5 chromosome, complete genome | 1076 | 85.0% | 1166.06 | 0.00e+00 | 88.7% |
| 122 | CP166730 | Comamonas sp. GB3 AK4-5 chromosome, complete genome | 1127 | 89.0% | 1248.3244 | 0.00e+00 | 88.7% |
| 123 | CP027667 | Melaminivora suipulveris strain SC2-9 chromosome, complete genome | 1091 | 86.2% | 1188.361 | 0.00e+00 | 88.7% |
| 124 | CP106951 | Eleftheria terrae strain P9846-PB chromosome, complete genome | 700 | 55.3% | 797.854 | 7.01e-226 | 88.7% |
| 125 | CP141274 | Delftia lacustris strain DSM 21246 chromosome, complete genome | 1265 | 99.9% | 1362.31 | 0.00e+00 | 88.6% |
| 126 | CP053553 | Diaphorobacter sp. JS3050 chromosome, complete genome | 1265 | 99.9% | 1444.0748999999998 | 0.00e+00 | 88.6% |
| 127 | CP169073 | Delftia lacustris strain ZWP15 chromosome, complete genome | 1265 | 99.9% | 1362.31 | 0.00e+00 | 88.6% |
| 128 | AP027205 | Delftia tsuruhatensis BR1R2 DNA, complete genome | 1265 | 99.9% | 1354.38 | 0.00e+00 | 88.6% |
| 129 | CP114201 | Delftia acidovorans strain BIM B-1761 chromosome, complete genome | 1265 | 99.9% | 1394.5145 | 0.00e+00 | 88.6% |
| 130 | CP065627 | Delftia acidovorans strain FDAARGOS_939 chromosome, complete genome | 1265 | 99.9% | 1394.5145 | 0.00e+00 | 88.6% |
| 131 | CP018101 | Delftia sp. HK171, complete genome | 1265 | 99.9% | 1394.5145 | 0.00e+00 | 88.6% |
| 132 | CP099605 | Comamonadaceae bacterium OTU4NAUVB1 chromosome, complete genome | 1189 | 93.9% | 1279.05 | 0.00e+00 | 88.6% |
| 133 | CP182947 | Piscinibacter sakaiensis strain 201-F6 chromosome, complete genome | 682 | 53.9% | 733.929 | 0.00e+00 | 88.6% |
| 134 | CP129980 | Diaphorobacter sp. C33 chromosome, complete genome | 1265 | 99.9% | 1436.1449 | 0.00e+00 | 88.5% |
| 135 | CP171815 | Delftia tsuruhatensis strain B7 chromosome, complete genome | 1265 | 99.9% | 1346.45 | 0.00e+00 | 88.5% |
| 136 | CP141536 | Delftia lacustris strain LzhVag01 chromosome, complete genome | 1265 | 99.9% | 1346.45 | 0.00e+00 | 88.5% |
| 137 | CP045291 | Delftia tsuruhatensis strain TR1180 chromosome, complete genome | 1265 | 99.9% | 1346.45 | 0.00e+00 | 88.5% |
| 138 | CP109857 | Delftia tsuruhatensis strain GSK TC1 chromosome, complete genome | 1265 | 99.9% | 1346.45 | 0.00e+00 | 88.5% |
| 139 | CP049795 | Delftia sp. WY8 chromosome, complete genome | 1265 | 99.9% | 1346.45 | 0.00e+00 | 88.5% |
| 140 | AP025556 | Delftia lacustris HQS1 DNA, complete genome | 1265 | 99.9% | 1346.45 | 0.00e+00 | 88.5% |
| 141 | CP109906 | Delftia sp. UGAL515B_04 chromosome, complete genome | 1265 | 99.9% | 1346.45 | 0.00e+00 | 88.5% |
| 142 | CP066006 | Delftia acidovorans strain FDAARGOS_997 chromosome, complete genome | 1265 | 99.9% | 1386.5845000000002 | 0.00e+00 | 88.5% |
| 143 | CP060783 | Diaphorobacter aerolatus strain KACC 16536 chromosome, complete genome | 995 | 78.6% | 1068.93 | 0.00e+00 | 88.5% |
| 144 | CP024645 | Piscinibacter gummiphilus strain NBRC 109400 chromosome, complete genome | 682 | 53.9% | 819.6583 | 1.91e-232 | 88.5% |
| 145 | CP015118 | Piscinibacter gummiphilus strain NS21, complete genome | 682 | 53.9% | 819.6583 | 1.91e-232 | 88.5% |
| 146 | CP094346 | Diaphorobacter sp. LI3 chromosome, complete genome | 1265 | 99.9% | 1428.2158000000002 | 0.00e+00 | 88.4% |
| 147 | CP019171 | Delftia acidovorans isolate ANG1, complete genome | 1265 | 99.9% | 1370.7245 | 0.00e+00 | 88.4% |
| 148 | CP065695 | Delftia acidovorans strain FDAARGOS_891 chromosome, complete genome | 1265 | 99.9% | 1370.7245 | 0.00e+00 | 88.4% |
| 149 | CP000884 | Delftia acidovorans SPH-1, complete genome | 1265 | 99.9% | 1370.7245 | 0.00e+00 | 88.4% |
| 150 | CP049910 | Diaphorobacter sp. HDW4A chromosome, complete genome | 1059 | 83.6% | 1124.923 | 0.00e+00 | 88.4% |
| 151 | CP075183 | Hydrogenophaga taeniospiralis strain LT2 chromosome, complete genome | 1144 | 90.4% | 1208.183 | 0.00e+00 | 88.4% |
| 152 | CP138496 | Variovorax sp. EBFNA2 chromosome, complete genome | 1265 | 99.9% | 1354.8654 | 0.00e+00 | 88.3% |
| 153 | CP033069 | Acidovorax sp. 1608163 chromosome, complete genome | 1195 | 94.4% | 1315.7208 | 0.00e+00 | 88.3% |
| 154 | OY729424 | MAG: uncultured Paucibacter sp. isolate 16becde1-7ee0-41cf-90b4-78e093466c12 genome assembly, chromosome: 1 | 689 | 54.4% | 724.5097000000001 | 8.40e-204 | 88.3% |
| 155 | CP171978 | Variovorax sp. UC74_104 chromosome, complete genome | 1265 | 99.9% | 1354.8654 | 0.00e+00 | 88.2% |
| 156 | CP027773 | Variovorax sp. PMC12 chromosome 1, complete sequence | 1265 | 99.9% | 1428.7093 | 0.00e+00 | 88.2% |
| 157 | CP035951 | Acidovorax sp. JMULE5 chromosome | 1196 | 94.5% | 1335.0448999999999 | 0.00e+00 | 88.2% |
| 158 | CP059256 | Burkholderiaceae bacterium isolate SSC6 chromosome, complete genome | 1187 | 93.8% | 1260.2133999999999 | 0.00e+00 | 88.2% |
| 159 | AP029019 | Acidovorax sp. DW039 DNA, complete genome | 1265 | 99.9% | 1306.8 | 0.00e+00 | 88.1% |
| 160 | CP070343 | Variovorax sp. PDNC026 chromosome, complete genome | 1265 | 99.9% | 1428.7093 | 0.00e+00 | 88.1% |
| 161 | CP118632 | Herbaspirillum sp. WKF16 chromosome, complete genome | 629 | 49.7% | 746.3149999999999 | 2.29e-210 | 88.1% |
| 162 | CP157618 | Variovorax sp. 375MFSha3.1 chromosome, complete genome | 1265 | 99.9% | 1331.0854 | 0.00e+00 | 88.0% |
| 163 | AB002234 | Comamonas acidovorans gene for subunit B protein of DNA gyrase, partial cds | 982 | 77.6% | 1011.45 | 0.00e+00 | 88.0% |
| 164 | CP162006 | Rhodoferax sp. WC2427 chromosome, complete genome | 720 | 56.9% | 738.3864 | 5.58e-208 | 88.0% |
| 165 | CP047650 | Xylophilus rhododendri strain KACC 21265 chromosome, complete genome | 1265 | 99.9% | 1290.95 | 0.00e+00 | 87.9% |
| 166 | CP045644 | Variovorax paradoxus strain 5C-2 chromosome, complete genome | 1265 | 99.9% | 1364.7839 | 0.00e+00 | 87.9% |
| 167 | CP172004 | Variovorax sp. UC122_21 chromosome 1, complete sequence | 1265 | 99.9% | 1396.9903 | 0.00e+00 | 87.9% |
| 168 | CP021361 | Acidovorax carolinensis strain NA3 chromosome 1, complete sequence | 1196 | 94.5% | 1253.7754 | 0.00e+00 | 87.9% |
| 169 | CP027792 | Pulveribacter suum strain SC2-7 chromosome, complete genome | 1160 | 91.6% | 1182.411 | 0.00e+00 | 87.9% |
| 170 | CP018845 | Herbaspirillum robiniae strain AA6 chromosome, complete genome | 629 | 49.7% | 720.5452 | 1.31e-202 | 87.9% |
| 171 | CP150725 | Achromobacter denitrificans strain TVCGH10476 chromosome, complete genome | 658 | 52.0% | 752.754 | 2.64e-212 | 87.9% |
| 172 | CP054569 | Achromobacter denitrificans strain FDAARGOS_787 chromosome, complete genome | 658 | 52.0% | 752.754 | 2.64e-212 | 87.9% |
| 173 | CP154792 | Achromobacter denitrificans strain BP1 chromosome, complete genome | 658 | 52.0% | 752.754 | 2.64e-212 | 87.9% |
| 174 | CP053987 | Achromobacter denitrificans strain FDAARGOS_786 chromosome, complete genome | 658 | 52.0% | 752.754 | 2.64e-212 | 87.9% |
| 175 | CP033730 | Achromobacter denitrificans strain PheN1 chromosome, complete genome | 658 | 52.0% | 752.754 | 2.64e-212 | 87.9% |
| 176 | CP020917 | Achromobacter denitrificans strain PR1, complete genome | 658 | 52.0% | 752.754 | 2.64e-212 | 87.9% |
| 177 | CP053986 | Achromobacter denitrificans strain FDAARGOS_788 chromosome, complete genome | 658 | 52.0% | 752.754 | 2.64e-212 | 87.9% |
| 178 | CP157611 | Variovorax sp. NFACC28 chromosome, complete genome | 1265 | 99.9% | 1389.0612 | 0.00e+00 | 87.8% |
| 179 | CP157613 | Variovorax sp. NFACC27 chromosome, complete genome | 1265 | 99.9% | 1389.0612 | 0.00e+00 | 87.8% |
| 180 | CP157609 | Variovorax sp. NFACC29 chromosome, complete genome | 1265 | 99.9% | 1389.0612 | 0.00e+00 | 87.8% |
| 181 | CP157614 | Variovorax sp. NFACC26 chromosome, complete genome | 1265 | 99.9% | 1389.0612 | 0.00e+00 | 87.8% |
| 182 | CP070223 | Hydrogenophaga sp. YM1 chromosome, complete genome | 1265 | 99.9% | 1344.9539 | 0.00e+00 | 87.8% |
| 183 | CP102931 | Variovorax paradoxus strain JBCE486 chromosome, complete genome | 1265 | 99.9% | 1307.2954 | 0.00e+00 | 87.8% |
| 184 | CP063166 | Variovorax paradoxus strain VAI-C chromosome, complete genome | 1265 | 99.9% | 1389.0602999999999 | 0.00e+00 | 87.8% |
| 185 | CP021648 | Acidovorax sp. T1, complete sequence | 1196 | 94.5% | 1213.64 | 0.00e+00 | 87.8% |
| 186 | CP021366 | Acidovorax carolinensis strain P4 chromosome, complete genome | 1196 | 94.5% | 1245.8454 | 0.00e+00 | 87.8% |
| 187 | CP021362 | Acidovorax carolinensis strain P3 chromosome, complete genome | 1200 | 94.8% | 1245.8454 | 0.00e+00 | 87.8% |
| 188 | CP016447 | Acidovorax sp. RAC01 chromosome, complete genome | 1196 | 94.5% | 1321.6634999999999 | 0.00e+00 | 87.8% |
| 189 | CP021359 | Acidovorax carolinensis strain NA2 chromosome, complete genome | 1196 | 94.5% | 1237.9154 | 0.00e+00 | 87.8% |
| 190 | CP029344 | Hydrogenophaga sp. NH-16 chromosome | 1227 | 96.9% | 1243.863 | 0.00e+00 | 87.8% |
| 191 | CP037867 | Hydrogenophaga pseudoflava strain DSM 1084 chromosome, complete genome | 1227 | 96.9% | 1243.8629999999998 | 0.00e+00 | 87.8% |
| 192 | JX264174 | Ralstonia solanacearum strain Rs-09-193 DNA gyrase B (gyrB) gene, partial cds | 646 | 51.0% | 654.639 | 0.00e+00 | 87.8% |
| 193 | CP036344 | Achromobacter denitrificans strain TB chromosome, complete genome | 658 | 52.0% | 746.807 | 1.63e-210 | 87.8% |
| 194 | CP106881 | Comamonas endophytica strain 5MLIR chromosome, complete genome | 1265 | 99.9% | 1267.16 | 0.00e+00 | 87.7% |
| 195 | CP040709 | Inhella inkyongensis strain IMCC1713 chromosome, complete genome | 1015 | 80.2% | 1046.1294 | 1.28e-300 | 87.7% |
| 196 | CP083589 | Herbaspirillum frisingense strain AU14559 chromosome, complete genome | 674 | 53.2% | 772.085 | 4.01e-218 | 87.7% |
| 197 | JN936190 | Ralstonia solanacearum strain TRs-Cal DNA gyrase B (gyrB) gene, partial cds | 646 | 51.0% | 646.71 | 2.21e-180 | 87.7% |
| 198 | KF275599 | Ralstonia solanacearum strain CFBP4812 DNA gyrase subunit B (gyrB) gene, partial cds | 581 | 45.9% | 581.295 | 1.09e-160 | 87.7% |
| 199 | CP157634 | Variovorax paradoxus strain 110B chromosome 1, complete sequence | 1265 | 99.9% | 1340.9958000000001 | 0.00e+00 | 87.6% |
| 200 | GQ980293 | Variovorax paradoxus clone F DNA gyrase subunit B-like (gyrB) gene, partial sequence | 1266 | 100.0% | 1261.21 | 0.00e+00 | 87.6% |
| 201 | CP136995 | Ottowia sp. SB7-C50 chromosome, complete genome | 1262 | 99.7% | 1253.28 | 0.00e+00 | 87.6% |
| 202 | AB014953 | Variovorax paradoxus gyrB gene for DNA gyrase subunit B, partial cds, clone: gy10066.icb | 1266 | 100.0% | 1253.28 | 0.00e+00 | 87.6% |
| 203 | CP157620 | Variovorax sp. 350MFTsu5.1 chromosome, complete genome | 1265 | 99.9% | 1335.0471 | 0.00e+00 | 87.6% |
| 204 | CP157622 | Variovorax sp. 278MFTsu5.1 chromosome, complete genome | 1265 | 99.9% | 1291.4354 | 0.00e+00 | 87.6% |
| 205 | AP028661 | Variovorax sp. V116 DNA, complete genome | 1265 | 99.9% | 1373.1993 | 0.00e+00 | 87.6% |
| 206 | CP116346 | Paucibacter sediminis strain S2-9 chromosome, complete genome | 1112 | 87.8% | 1111.051 | 0.00e+00 | 87.6% |
| 207 | CP116009 | Ramlibacter tataouinensis strain DMF-7 chromosome, complete genome | 1084 | 85.6% | 1079.828 | 0.00e+00 | 87.6% |
| 208 | MZ819009 | Ralstonia pseudosolanacearum strain PL210 DNA topoisomerase (ATP-hydrolyzing) subunit B (gyrB) gene, partial cds | 691 | 54.6% | 688.337 | 0.00e+00 | 87.6% |
| 209 | KJ626167 | Ralstonia solanacearum strain RsRC-B1 DNA gyrase gene, partial cds | 691 | 54.6% | 688.337 | 0.00e+00 | 87.6% |
| 210 | CP157624 | Variovorax sp. 160MFSha2.1 chromosome, complete genome | 1265 | 99.9% | 1327.1181 | 0.00e+00 | 87.5% |
| 211 | AP028659 | Variovorax sp. V15 DNA, complete genome | 1265 | 99.9% | 1327.1171 | 0.00e+00 | 87.5% |
| 212 | CP062121 | Variovorax sp. 38R chromosome, complete genome | 1265 | 99.9% | 1357.3402999999998 | 0.00e+00 | 87.5% |
| 213 | CP179718 | Variovorax sp. SCN45 chromosome 1, complete sequence | 1265 | 99.9% | 1357.3393 | 0.00e+00 | 87.5% |
| 214 | CP091716 | Variovorax paradoxus strain IPSP_MA_2 chromosome | 1265 | 99.9% | 1357.3393 | 0.00e+00 | 87.5% |
| 215 | AP028671 | Variovorax sp. V77 DNA, complete genome | 1265 | 99.9% | 1357.3393 | 0.00e+00 | 87.5% |
| 216 | AP028663 | Variovorax sp. V118 DNA, complete genome | 1265 | 99.9% | 1357.3393 | 0.00e+00 | 87.5% |
| 217 | AP028666 | Variovorax sp. V35 DNA, complete genome | 1265 | 99.9% | 1357.3393 | 0.00e+00 | 87.5% |
| 218 | CP049885 | Acidovorax sp. HDW3 chromosome, complete genome | 1206 | 95.3% | 1193.81 | 0.00e+00 | 87.5% |
| 219 | CP171997 | Acidovorax delafieldii strain UC81_30 chromosome, complete genome | 1195 | 94.4% | 1287.9654 | 0.00e+00 | 87.5% |
| 220 | GQ980302 | Acidovorax delafieldii clone R1 DNA gyrase subunit B-like (gyrB) gene, partial sequence | 893 | 70.5% | 882.599 | 0.00e+00 | 87.5% |
| 221 | JX264178 | Ralstonia solanacearum strain Rs-11-349 DNA gyrase B (gyrB) gene, partial cds | 646 | 51.0% | 638.781 | 5.39e-178 | 87.5% |
| 222 | JX264167 | Ralstonia solanacearum strain Rs-10-253 DNA gyrase B (gyrB) gene, partial cds | 646 | 51.0% | 638.781 | 5.39e-178 | 87.5% |
| 223 | KC188152 | Ralstonia solanacearum strain CFBP 3059 DNA gyrase B (gyrB) gene, partial cds | 612 | 48.3% | 603.1 | 2.97e-167 | 87.5% |
| 224 | KF275598 | Ralstonia solanacearum strain PSS525 DNA gyrase subunit B (gyrB) gene, partial cds | 581 | 45.9% | 573.366 | 2.65e-158 | 87.5% |
| 225 | AP029225 | Beta proteobacterium TEGF003 DNA, complete genome | 1265 | 99.9% | 1235.44 | 0.00e+00 | 87.4% |
| 226 | CP170558 | Variovorax boronicumulans strain UC19_11 chromosome, complete genome | 1265 | 99.9% | 1317.2039 | 0.00e+00 | 87.4% |
| 227 | LR743507 | Variovorax paradoxus isolate vvax genome assembly, chromosome: 1 | 1265 | 99.9% | 1341.4903 | 0.00e+00 | 87.4% |
| 228 | CP117193 | Acidovorax temperans strain LMJ chromosome, complete genome | 1196 | 94.5% | 1274.0854000000002 | 0.00e+00 | 87.4% |
| 229 | AP026969 | Comamonadaceae bacterium OS-1 DNA, nearly complete genome | 700 | 55.3% | 682.391 | 0.00e+00 | 87.4% |
| 230 | JN936186 | Ralstonia solanacearum strain GRs-Pvl DNA gyrase B (gyrB) gene, gyrB-27 allele, partial cds | 646 | 51.0% | 630.852 | 1.31e-175 | 87.4% |
| 231 | JX264173 | Ralstonia solanacearum strain Rs-09-198 DNA gyrase B (gyrB) gene, partial cds | 646 | 51.0% | 630.852 | 1.31e-175 | 87.4% |
| 232 | KF275597 | Ralstonia solanacearum strain CMR44 DNA gyrase subunit B (gyrB) gene, partial cds | 581 | 45.9% | 565.437 | 6.45e-156 | 87.4% |
| 233 | LT907988 | Alcaligenaceae bacterium LMG 29303 isolate Orrdi1 genome assembly, chromosome: I | 842 | 66.5% | 926.1946 | 1.63e-264 | 87.4% |
| 234 | CP046508 | Variovorax sp. RKNM96 chromosome, complete genome | 1265 | 99.9% | 1301.3448999999998 | 0.00e+00 | 87.3% |
| 235 | CP157636 | Variovorax paradoxus strain 4MFCol3.1 chromosome, complete genome | 1265 | 99.9% | 1333.5593 | 0.00e+00 | 87.3% |
| 236 | CP001220 | Comamonas thiooxydans strain CNB-1 substr. CNB-2 chromosome, complete genome | 1106 | 87.4% | 1107.5794 | 0.00e+00 | 87.3% |
| 237 | CP053418 | Ramlibacter terrae strain H242 chromosome, complete genome | 1212 | 95.7% | 1172.501 | 0.00e+00 | 87.3% |
| 238 | JX264176 | Ralstonia solanacearum strain Rs-10-216 DNA gyrase B (gyrB) gene, partial cds | 646 | 51.0% | 630.852 | 1.31e-175 | 87.3% |
| 239 | CP026124 | Achromobacter sp. AONIH1 chromosome, complete genome | 622 | 49.1% | 680.9000000000001 | 1.13e-190 | 87.3% |
| 240 | CP023284 | Variovorax boronicumulans strain J1 chromosome, complete genome | 1265 | 99.9% | 1293.4239 | 0.00e+00 | 87.2% |
| 241 | CP002417 | Variovorax paradoxus EPS, complete genome | 1265 | 99.9% | 1317.7003 | 0.00e+00 | 87.2% |
| 242 | CP147774 | Acidovorax temperans strain AA22 chromosome | 1200 | 94.8% | 1258.2354 | 0.00e+00 | 87.2% |
| 243 | CP019236 | Rhodoferax koreense, complete genome | 1196 | 94.5% | 1242.3726000000001 | 0.00e+00 | 87.2% |
| 244 | CP004012 | Ralstonia solanacearum FQY_4, complete genome | 1010 | 79.8% | 1044.6381999999999 | 3.60e-300 | 87.2% |
| 245 | FN543105 | Curvibacter putative symbiont of Hydra magnipapillata genomic scaffold HmaUn_WGA70176_1 | 704 | 55.6% | 682.391 | 0.00e+00 | 87.2% |
| 246 | GU734706 | Sphaerotilus natans subsp. natans strain D-380 DNA gyrase subunit B (gyrB) gene, partial cds | 690 | 54.5% | 662.568 | 0.00e+00 | 87.2% |
| 247 | CP003911 | Variovorax paradoxus B4 chromosome 1, complete sequence | 1265 | 99.9% | 1317.7012 | 0.00e+00 | 87.1% |
| 248 | CP046622 | Variovorax paradoxus strain CSUSB chromosome, complete genome | 1265 | 99.9% | 1235.9354 | 0.00e+00 | 87.1% |
| 249 | CP043573 | Comamonas testosteroni strain R5-28 chromosome, complete genome | 1160 | 91.6% | 1107.087 | 0.00e+00 | 87.1% |
| 250 | CP140157 | Comamonas testosteroni strain DSMZ 14576 chromosome, complete genome | 1156 | 91.3% | 1107.087 | 0.00e+00 | 87.1% |
| 251 | LN899827 | Ralstonia solanacearum genome assembly 9 genomes, chromosome : IX | 1010 | 79.8% | 1036.7092 | 8.77e-298 | 87.1% |
| 252 | AP025730 | Sphaerotilus sp. FB-5 DNA, complete genome | 693 | 54.7% | 660.586 | 0.00e+00 | 87.1% |
| 253 | CP006704 | Comamonas testosteroni TK102, complete genome | 1160 | 91.6% | 1172.9939 | 0.00e+00 | 87.0% |
| 254 | CP059067 | Rhizobacter sp. AJA081-3 chromosome | 1116 | 88.2% | 1083.7924 | 0.00e+00 | 87.0% |
| 255 | CP011371 | Schlegelella brevitalea strain DSM 7029, complete genome | 692 | 54.7% | 658.603 | 0.00e+00 | 87.0% |
| 256 | CP150897 | Achromobacter xylosoxidans strain TVCGH4589 chromosome, complete genome | 622 | 49.1% | 663.0600000000001 | 2.65e-185 | 87.0% |
| 257 | LT607803 | Variovorax sp. HW608 genome assembly, chromosome: I | 1265 | 99.9% | 1187.87 | 0.00e+00 | 86.9% |
| 258 | CP138513 | Variovorax paradoxus strain SPNA7 chromosome, complete genome | 1263 | 99.8% | 1297.8712 | 0.00e+00 | 86.9% |
| 259 | AP028657 | Variovorax sp. V11 DNA, complete genome | 1265 | 99.9% | 1293.9112 | 0.00e+00 | 86.9% |
| 260 | AP028667 | Variovorax sp. V59 DNA, complete genome | 1265 | 99.9% | 1293.9112 | 0.00e+00 | 86.9% |
| 261 | CP094240 | Comamonas sp. 7D-2evo2 chromosome, complete genome | 1171 | 92.5% | 1178.9409 | 0.00e+00 | 86.9% |
| 262 | CP094238 | Comamonas sp. 7D-2 chromosome, complete genome | 1171 | 92.5% | 1178.9409 | 0.00e+00 | 86.9% |
| 263 | CP094239 | Comamonas sp. 7D-2evo1 chromosome, complete genome | 1171 | 92.5% | 1178.9409 | 0.00e+00 | 86.9% |
| 264 | CP063057 | Comamonas thiooxydans strain ZDHYF418 chromosome, complete genome | 1171 | 92.5% | 1203.2203 | 0.00e+00 | 86.9% |
| 265 | CP110415 | Caldimonas thermodepolymerans strain LMG 21645 chromosome, complete genome | 1107 | 87.4% | 1033.743 | 6.85e-297 | 86.9% |
| 266 | CP110416 | Caldimonas thermodepolymerans strain DSM 15264 chromosome, complete genome | 1107 | 87.4% | 1033.743 | 6.85e-297 | 86.9% |
| 267 | CP064338 | Caldimonas thermodepolymerans strain DSM 15344 chromosome, complete genome | 1107 | 87.4% | 1033.743 | 6.85e-297 | 86.9% |
| 268 | CP181346 | Delftia sp. PS-11 chromosome, complete genome | 1265 | 99.9% | 1179.94 | 0.00e+00 | 86.8% |
| 269 | CP168540 | Variovorax sp. Varisp41 strain CT11-41 chromosome 1, complete sequence | 1265 | 99.9% | 1253.7749 | 0.00e+00 | 86.8% |
| 270 | CP157632 | Variovorax paradoxus strain 295MFChir4.1 chromosome 1, complete sequence | 1265 | 99.9% | 1253.7739 | 0.00e+00 | 86.8% |
| 271 | CP157630 | Variovorax paradoxus strain 349MFTsu5.1 chromosome 1, complete sequence | 1265 | 99.9% | 1253.7739 | 0.00e+00 | 86.8% |
| 272 | CP157628 | Variovorax paradoxus strain 369MFTsu5.1 chromosome 1, complete sequence | 1265 | 99.9% | 1253.7739 | 0.00e+00 | 86.8% |
| 273 | CP027669 | Simplicispira suum strain SC1-8 chromosome, complete genome | 1200 | 94.8% | 1118.49 | 0.00e+00 | 86.8% |
| 274 | CP101743 | Comamonas sp. C11 chromosome, complete genome | 1171 | 92.5% | 1089.247 | 0.00e+00 | 86.8% |
| 275 | AP025193 | Comamonas thiooxydans NR4028 DNA, complete genome | 1171 | 92.5% | 1089.247 | 0.00e+00 | 86.8% |
| 276 | CP090445 | Comamonas testosteroni strain X13 chromosome, complete genome | 1171 | 92.5% | 1163.0828999999999 | 0.00e+00 | 86.8% |
| 277 | CP053920 | Comamonas thiooxydans strain QYY chromosome, complete genome | 1171 | 92.5% | 1121.4554 | 0.00e+00 | 86.8% |
| 278 | CP066783 | Comamonas fluminis strain CJ34 chromosome, complete genome | 1107 | 87.4% | 1113.5261 | 0.00e+00 | 86.8% |
| 279 | KC188149 | Ralstonia solanacearum strain GBBC 1112 DNA gyrase B (gyrB) gene, partial cds | 691 | 54.6% | 640.763 | 1.36e-178 | 86.8% |
| 280 | MZ818975 | Ralstonia solanacearum strain A5287 DNA topoisomerase (ATP-hydrolyzing) subunit B (gyrB) gene, partial cds | 691 | 54.6% | 640.763 | 1.36e-178 | 86.8% |
| 281 | KC188150 | Ralstonia solanacearum strain GBBC 729 DNA gyrase B (gyrB) gene, partial cds | 691 | 54.6% | 640.763 | 1.36e-178 | 86.8% |
| 282 | CP045094 | Burkholderia perseverans strain INN12 chromosome 1 | 635 | 50.2% | 593.189 | 2.86e-164 | 86.8% |
| 283 | CP033641 | Burkholderia glumae strain YH38 chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 284 | CP100203 | Burkholderia glumae strain PW30RS chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 285 | CP100268 | Burkholderia glumae strain BGR68S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 286 | CP100238 | Burkholderia glumae strain BGR22S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 287 | CP100256 | Burkholderia glumae strain BGR76S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 288 | CP100280 | Burkholderia glumae strain YH8 chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 289 | CP023203 | Burkholderia glumae strain 336gr-1 chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 290 | CP001503 | Burkholderia glumae BGR1 chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 291 | CP033645 | Burkholderia glumae strain YH43 chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 292 | CP130145 | Burkholderia glumae strain BD_21g chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 293 | CP100150 | Burkholderia glumae strain BGR82S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 294 | CP100244 | Burkholderia glumae strain BGR28S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 295 | CP033666 | Burkholderia glumae strain BGR21S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 296 | CP100156 | Burkholderia glumae strain BGR49S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 297 | CP100250 | Burkholderia glumae strain BGR35S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 298 | CP100300 | Burkholderia glumae strain BGR81S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 299 | CP100215 | Burkholderia glumae strain SW2RS chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 300 | CP100186 | Burkholderia glumae strain SL-947S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 301 | CP021074 | Burkholderia glumae strain 957856-41-c chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 302 | CP100296 | Burkholderia glumae strain SL-2395S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 303 | CP100136 | Burkholderia glumae strain R93 chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 304 | CP033653 | Burkholderia glumae strain YH67 chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 305 | CP033672 | Burkholderia glumae strain BGR80S chromosome, complete genome | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 306 | CP047315 | Burkholderia glumae AU6208 chromosome au01, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 307 | CP100291 | Burkholderia glumae strain R2 chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 308 | CP100197 | Burkholderia glumae strain PERW1RS chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 309 | CP100209 | Burkholderia glumae strain EW10RS chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 310 | CP100144 | Burkholderia glumae strain BGR39S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 311 | CP100168 | Burkholderia glumae strain BGR59S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 312 | CP100174 | Burkholderia glumae strain BGR86S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 313 | CP100262 | Burkholderia glumae strain BGR79S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 314 | CP100162 | Burkholderia glumae strain BGR57S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 315 | CP066791 | Burkholderia glumae strain FDAARGOS_921 chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 316 | CP100181 | Burkholderia glumae strain R5 chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 317 | CP009435 | Burkholderia glumae LMG 2196 = ATCC 33617 chromosome I, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 318 | CP100221 | Burkholderia glumae strain POW17RS chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 319 | CP100191 | Burkholderia glumae strain TW34RS chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 320 | CP100227 | Burkholderia glumae strain SEW1RS chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 321 | CP099587 | Burkholderia glumae strain GR20004 chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 322 | CP100274 | Burkholderia glumae strain BGR73S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 323 | CP052867 | Burkholderia glumae strain HN1 chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 324 | CP033664 | Burkholderia glumae strain BGR15S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 325 | CP100233 | Burkholderia glumae strain BGR19S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 326 | CP100131 | Burkholderia glumae strain BGR85S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 327 | CP100140 | Burkholderia glumae strain BGR33S chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 328 | CP065601 | Burkholderia glumae strain FDAARGOS_949 chromosome 2, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 329 | CP045087 | Burkholderia glumae strain GX chromosome 1, complete sequence | 632 | 49.9% | 587.242 | 1.76e-162 | 86.8% |
| 330 | CP138515 | Variovorax paradoxus strain 2u118 chromosome, complete genome | 1265 | 99.9% | 1245.8468 | 0.00e+00 | 86.7% |
| 331 | CP096918 | Comamonas aquatica strain NY8661 chromosome, complete genome | 1265 | 99.9% | 1172.01 | 0.00e+00 | 86.7% |
| 332 | CP016603 | Comamonas aquatica strain CJG genome | 1265 | 99.9% | 1172.01 | 0.00e+00 | 86.7% |
| 333 | CP104279 | Comamonas aquatica strain SCLZS63 chromosome, complete genome | 1265 | 99.9% | 1164.08 | 0.00e+00 | 86.7% |
| 334 | CP072916 | Comamonas aquatica strain NEB418 chromosome, complete genome | 1265 | 99.9% | 1164.08 | 0.00e+00 | 86.7% |
| 335 | LR594662 | Variovorax sp. RA8 genome assembly, chromosome: 1 | 1265 | 99.9% | 1164.08 | 0.00e+00 | 86.7% |
| 336 | LR813086 | Comamonas aquatica isolate BB1454 genome assembly, chromosome: BB1454_hybrid | 1265 | 99.9% | 1164.08 | 0.00e+00 | 86.7% |
| 337 | CP071796 | Ottowia testudinis strain 27C chromosome, complete genome | 1262 | 99.7% | 1158.13 | 0.00e+00 | 86.7% |
| 338 | CP170553 | Hydrogenophaga sp. UC242_50 chromosome | 1265 | 99.9% | 1152.19 | 0.00e+00 | 86.7% |
| 339 | CP170552 | Hydrogenophaga sp. UC242_53 chromosome, complete genome | 1265 | 99.9% | 1152.19 | 0.00e+00 | 86.7% |
| 340 | CP063400 | Hydrogenophaga sp. SL48 chromosome, complete genome | 1265 | 99.9% | 1172.5054 | 0.00e+00 | 86.7% |
| 341 | GQ980296 | Acidovorax delafieldii clone K DNA gyrase subunit B-like (gyrB) gene, partial sequence | 1188 | 93.8% | 1094.7 | 0.00e+00 | 86.7% |
| 342 | CP083911 | Tepidimonas taiwanensis strain LMG 22826 chromosome, complete genome | 1099 | 86.8% | 1019.38 | 0.00e+00 | 86.7% |
| 343 | CP043568 | Comamonas testosteroni strain T5-67 chromosome, complete genome | 1171 | 92.5% | 1155.1539 | 0.00e+00 | 86.7% |
| 344 | CP083938 | Comamonas thiooxydans strain CSUSB4 chromosome, complete genome | 1171 | 92.5% | 1081.318 | 0.00e+00 | 86.7% |
| 345 | LN879547 | Comamonas thiooxydans isolate C19 genome assembly, chromosome: I | 1171 | 92.5% | 1081.318 | 0.00e+00 | 86.7% |
| 346 | CP079703 | Comamonas thiooxydans strain N1 chromosome, complete genome | 1171 | 92.5% | 1081.318 | 0.00e+00 | 86.7% |
| 347 | CP029606 | Methylibium sp. Pch-M chromosome, complete genome | 1145 | 90.4% | 1131.3663000000001 | 0.00e+00 | 86.7% |
| 348 | CP150899 | Achromobacter xylosoxidans strain TVCGH4238 chromosome, complete genome | 622 | 49.1% | 647.2014999999999 | 1.57e-180 | 86.7% |
| 349 | KJ628288 | Ralstonia solanacearum strain CRs_Gr gyrase B (gyrB) gene, partial cds | 600 | 47.4% | 555.526 | 6.22e-153 | 86.7% |
| 350 | CP003872 | Acidovorax sp. KKS102, complete genome | 1196 | 94.5% | 1094.7 | 0.00e+00 | 86.6% |
| 351 | CP154474 | Vandammella animalimorsus strain W29-2 chromosome, complete genome | 1058 | 83.6% | 959.907 | 0.00e+00 | 86.6% |
| 352 | CP129672 | Comamonas testosteroni strain MWF001 chromosome, complete genome | 1160 | 91.6% | 1133.3488 | 0.00e+00 | 86.6% |
| 353 | CP016449 | Hydrogenophaga sp. RAC07 chromosome, complete genome | 1225 | 96.8% | 1115.016 | 0.00e+00 | 86.6% |
| 354 | CP029210 | Aquabacterium olei strain NBRC 110486 chromosome, complete genome | 1102 | 87.0% | 1028.2884000000001 | 3.00e-295 | 86.6% |
| 355 | JN936188 | Ralstonia solanacearum strain PRs-Pun DNA gyrase B (gyrB) gene, partial cds | 691 | 54.6% | 632.834 | 3.32e-176 | 86.6% |
| 356 | AB020265 | Delftia acidovorans gyrB gene for DNA gyrase subunit B, partial cds, strain: JCM6217 | 687 | 54.3% | 632.834 | 3.32e-176 | 86.6% |
| 357 | CP013692 | Paucibacter sp. KCTC 42545, complete genome | 800 | 63.2% | 730.457 | 1.36e-205 | 86.6% |
| 358 | CP035900 | Burkholderia glumae strain 257sh-1 chromosome 1, complete sequence | 632 | 49.9% | 579.313 | 4.29e-160 | 86.6% |
| 359 | CP021157 | Burkholderia glumae strain 411gr-6 chromosome 1, complete sequence | 632 | 49.9% | 579.313 | 4.29e-160 | 86.6% |
| 360 | CP033656 | Burkholderia glumae strain BGR13S chromosome 1, complete sequence | 632 | 49.9% | 579.313 | 4.29e-160 | 86.6% |
| 361 | CP052132 | Burkholderia glumae strain HN2 chromosome 1, complete sequence | 632 | 49.9% | 579.313 | 4.29e-160 | 86.6% |
| 362 | CP100285 | Burkholderia glumae strain BGR48S chromosome 1, complete sequence | 632 | 49.9% | 579.313 | 4.29e-160 | 86.6% |
| 363 | CP157626 | Variovorax paradoxus NBRC 15149 chromosome 1, complete sequence | 1265 | 99.9% | 1222.0558 | 0.00e+00 | 86.5% |
| 364 | CP137854 | Xylophilus sp. GOD-11R chromosome, complete genome | 1265 | 99.9% | 1148.22 | 0.00e+00 | 86.5% |
| 365 | AB014966 | Variovorax paradoxus gyrB gene for DNA gyrase subunit B, partial cds, clone: gy10337.icb | 1265 | 99.9% | 1148.22 | 0.00e+00 | 86.5% |
| 366 | AP028664 | Variovorax sp. V213 DNA, complete genome | 1265 | 99.9% | 1256.2525 | 0.00e+00 | 86.5% |
| 367 | AP026738 | Comamonas thiooxydans R2 DNA, complete genome | 1160 | 91.6% | 1125.4199 | 0.00e+00 | 86.5% |
| 368 | CP044131 | Comamonas testosteroni strain NFYY023 chromosome, complete genome | 1080 | 85.3% | 984.187 | 5.67e-282 | 86.5% |
| 369 | CP170561 | Burkholderiaceae bacterium UC74_6 chromosome, complete genome | 1102 | 87.0% | 996.08 | 1.49e-285 | 86.5% |
| 370 | CP126124 | MAG: Burkholderiaceae bacterium isolate bin_007 chromosome, complete genome | 701 | 55.4% | 636.798 | 2.13e-177 | 86.5% |
| 371 | AB021457 | Bacterium rA10 gyrB gene for subunit B protein of DNA gyrase, partial cds | 668 | 52.8% | 611.029 | 1.22e-169 | 86.5% |
| 372 | DQ657377 | Ralstonia solanacearum strain UW469 DNA gyrase subunit B (gyrB) gene, partial cds | 598 | 47.2% | 543.632 | 2.36e-149 | 86.5% |
| 373 | CP159956 | Hydrogenophaga sp. ANAO-22 chromosome, complete genome | 1265 | 99.9% | 1120.47 | 0.00e+00 | 86.4% |
| 374 | CP067086 | Comamonas testosteroni strain G1 chromosome | 1156 | 91.3% | 1043.6547 | 7.11e-300 | 86.4% |
| 375 | CP174505 | Comamonas testosteroni strain VSPL.dLG chromosome, complete genome | 1157 | 91.4% | 1037.7079 | 4.39e-298 | 86.4% |
| 376 | CP010799 | Ralstonia mannitolilytica strain SN82F48 chromosome 1, complete sequence | 949 | 75.0% | 855.832 | 2.47e-243 | 86.4% |
| 377 | CP049132 | Ralstonia mannitolilytica strain Guangzhou-RMAB10 chromosome 1 | 949 | 75.0% | 855.832 | 2.47e-243 | 86.4% |
| 378 | AB020259 | Delftia acidovorans gyrB gene for DNA gyrase subunit B, partial cds, strain: JCM6211 | 687 | 54.3% | 616.976 | 1.97e-171 | 86.4% |
| 379 | AB020266 | Delftia acidovorans gyrB gene for DNA gyrase subunit B, partial cds, strain: JCM6219 | 687 | 54.3% | 616.976 | 1.97e-171 | 86.4% |
| 380 | AB020260 | Delftia acidovorans gyrB gene for DNA gyrase subunit B, partial cds, strain: JCM6212 | 682 | 53.9% | 614.994 | 7.80e-171 | 86.4% |
| 381 | FJ161075 | Sphaerotilus montanus strain HS DNA gyrase subunit B (gyrB) gene, partial cds | 689 | 54.4% | 613.011 | 3.08e-170 | 86.4% |
| 382 | CP020046 | Thiomonas intermedia strain ATCC 15466 chromosome, complete genome | 755 | 59.6% | 680.8999 | 1.13e-190 | 86.4% |
| 383 | MT277404 | Ralstonia solanacearum strain AN_PRSGr DNA gyrase B (gyrB) gene, partial cds | 598 | 47.2% | 535.703 | 5.76e-147 | 86.4% |
| 384 | CP123990 | Variovorax paradoxus strain MGMM5 chromosome, complete genome | 1265 | 99.9% | 1156.6454 | 0.00e+00 | 86.3% |
| 385 | CP075184 | Acidovorax radicis strain 79 chromosome, complete genome | 1196 | 94.5% | 1070.91 | 0.00e+00 | 86.3% |
| 386 | CP092733 | Comamonas thiooxydans strain CHJ01 chromosome, complete genome | 1171 | 92.5% | 1041.672 | 2.81e-299 | 86.3% |
| 387 | CP000245 | Ramlibacter tataouinensis TTB310, complete genome | 1178 | 93.0% | 1045.637 | 1.80e-300 | 86.3% |
| 388 | CP181388 | Mutant Rubrivivax gelatinosus isolate YF10, complete genome | 1105 | 87.3% | 1056.0397 | 1.33e-303 | 86.3% |
| 389 | CP181386 | Mutant Rubrivivax gelatinosus isolate YF6, complete genome | 1105 | 87.3% | 1056.0397 | 1.33e-303 | 86.3% |
| 390 | CP181387 | Mutant Rubrivivax gelatinosus isolate AJ1, complete genome | 1105 | 87.3% | 1056.0397 | 1.33e-303 | 86.3% |
| 391 | CP001013 | Leptothrix cholodnii SP-6 chromosome, complete genome | 1018 | 80.4% | 921.2464 | 5.02e-263 | 86.3% |
| 392 | CP104562 | Roseateles amylovorans strain BIM B-1768 chromosome, complete genome | 1085 | 85.7% | 1036.217 | 1.23e-297 | 86.3% |
| 393 | CP047136 | Ralstonia solanacearum strain CFBP 8697 chromosome, complete genome | 904 | 71.4% | 805.783 | 2.87e-228 | 86.3% |
| 394 | AB020268 | Delftia acidovorans gyrB gene for DNA gyrase subunit B, partial cds, strain: JCM6232 | 682 | 53.9% | 607.065 | 1.90e-168 | 86.3% |
| 395 | CP002580 | Burkholderia plantarii strain PG1 chromosome 1, complete sequence | 632 | 49.9% | 563.455 | 2.55e-155 | 86.3% |
| 396 | CP021455 | Comamonas serinivorans strain DSM 26136 chromosome, complete genome | 1265 | 99.9% | 1114.52 | 0.00e+00 | 86.2% |
| 397 | CP139994 | Comamonas testosteroni strain HAMBI_0403 chromosome, complete genome | 1160 | 91.6% | 1101.6326 | 0.00e+00 | 86.2% |
| 398 | CP010951 | Ramlibacter tataouinensis strain 5-10, complete genome | 1187 | 93.8% | 1047.6190000000001 | 4.56e-301 | 86.2% |
| 399 | CP049919 | Roseateles sp. DAIF2 chromosome, complete genome | 1102 | 87.0% | 972.293 | 2.16e-278 | 86.2% |
| 400 | CP000316 | Polaromonas sp. JS666, complete genome | 774 | 61.1% | 748.2977000000001 | 5.80e-211 | 86.2% |
| 401 | CP011257 | Ralstonia mannitolilytica strain SN83A39 chromosome 1, complete sequence | 949 | 75.0% | 839.974 | 1.47e-238 | 86.2% |
| 402 | AB020249 | Comamonas sp. MBIC 3276 gyrB gene for DNA gyrase subunit B, partial cds, strain: MBIC 3276 | 652 | 51.5% | 579.313 | 4.29e-160 | 86.2% |
| 403 | AP029224 | Beta proteobacterium TEGF002 DNA, complete genome | 1265 | 99.9% | 1108.58 | 0.00e+00 | 86.1% |
| 404 | AP029223 | Beta proteobacterium INBF004 DNA, complete genome | 1265 | 99.9% | 1108.58 | 0.00e+00 | 86.1% |
| 405 | CP027666 | Ottowia oryzae strain KADR8-3 chromosome, complete genome | 1262 | 99.7% | 1102.63 | 0.00e+00 | 86.1% |
| 406 | CP089742 | Melaminivora jejuensis strain KACC 19629 chromosome, complete genome | 1200 | 94.8% | 1079.3354 | 0.00e+00 | 86.1% |
| 407 | CP125947 | Comamonas resistens strain ZM22 chromosome, complete genome | 1124 | 88.8% | 980.2225 | 8.85e-281 | 86.1% |
| 408 | CP000555 | Methylibium petroleiphilum PM1, complete genome | 1145 | 90.4% | 1075.8632 | 0.00e+00 | 86.1% |
| 409 | CP110257 | Caldimonas aquatica strain LMG 23380 chromosome, complete genome | 1019 | 80.5% | 891.02 | 6.30e-254 | 86.1% |
| 410 | CP132507 | Rhodoferax mekongensis strain TBRC 17307 chromosome, complete genome | 1156 | 91.3% | 1015.903 | 1.61e-291 | 86.1% |
| 411 | AP026970 | Comamonadaceae bacterium OS-4 DNA, complete genome | 1094 | 86.4% | 964.364 | 5.26e-276 | 86.1% |
| 412 | CP000267 | Rhodoferax ferrireducens T118, complete genome | 692 | 54.7% | 603.1 | 2.97e-167 | 86.1% |
| 413 | CP138198 | Rhodoferax ferrireducens strain YZ-1 chromosome, complete genome | 692 | 54.7% | 603.1 | 2.97e-167 | 86.1% |
| 414 | AB020258 | Delftia acidovorans gyrB gene for DNA gyrase subunit B, partial cds, strain: JCM6207 | 687 | 54.3% | 601.118 | 1.17e-166 | 86.1% |
| 415 | AB020263 | Delftia acidovorans gyrB gene for DNA gyrase subunit B, partial cds, strain: JCM6215 | 682 | 53.9% | 599.136 | 4.63e-166 | 86.1% |
| 416 | CP007212 | Burkholderia plantarii strain ATCC 43733 chromosome 1, complete sequence | 632 | 49.9% | 555.526 | 6.22e-153 | 86.1% |
| 417 | CP157616 | Variovorax sp. KK3 chromosome, complete genome | 1265 | 99.9% | 1214.1339 | 0.00e+00 | 86.0% |
| 418 | CP012687 | Ralstonia solanacearum strain UY031, complete sequence | 904 | 71.4% | 781.9960000000001 | 4.16e-221 | 86.0% |
| 419 | CP047138 | Ralstonia solanacearum strain CFBP 8695 chromosome, complete genome | 904 | 71.4% | 781.9960000000001 | 4.16e-221 | 86.0% |
| 420 | CP088233 | Ralstonia solanacearum strain UW72 chromosome | 904 | 71.4% | 781.9960000000001 | 4.16e-221 | 86.0% |
| 421 | CP060295 | Variovorax sp. PAMC26660 chromosome, complete genome | 1265 | 99.9% | 1150.6958 | 0.00e+00 | 85.9% |
| 422 | CP054424 | Rhodoferax sp. BAB1 chromosome, complete genome | 1265 | 99.9% | 1186.8667 | 0.00e+00 | 85.9% |
| 423 | CP104377 | Comamonas squillarum strain PR12 chromosome, complete genome | 1194 | 94.3% | 1101.1377 | 0.00e+00 | 85.9% |
| 424 | CP043575 | Comamonas koreensis strain T50-37 chromosome, complete genome | 1194 | 94.3% | 1093.2077 | 0.00e+00 | 85.9% |
| 425 | CP078069 | Comamonas sp. NLF-1-9 chromosome, complete genome | 1135 | 89.7% | 973.783 | 0.00e+00 | 85.9% |
| 426 | CP156659 | Vandammella animalimorsus strain SK20231019-0001 chromosome, complete genome | 1107 | 87.4% | 946.032 | 0.00e+00 | 85.9% |
| 427 | AP014568 | Serpentinomonas raichei DNA, complete genome | 997 | 78.8% | 858.812 | 0.00e+00 | 85.9% |
| 428 | CP044549 | Hydrogenophaga sp. BPS33 chromosome, complete genome | 1187 | 93.8% | 1019.8679999999999 | 1.03e-292 | 85.9% |
| 429 | CP002039 | Herbaspirillum seropedicae SmR1, complete genome | 1046 | 82.6% | 1003.0114 | 1.22e-287 | 85.9% |
| 430 | CP049334 | Herbaspirillum seropedicae strain Z69 chromosome | 1046 | 82.6% | 1003.0114 | 1.22e-287 | 85.9% |
| 431 | CP011930 | Herbaspirillum seropedicae strain Z67, complete genome | 1046 | 82.6% | 1003.0114 | 1.22e-287 | 85.9% |
| 432 | CP034395 | Herbaspirillum seropedicae strain AU13965 chromosome, complete genome | 1046 | 82.6% | 999.0474 | 1.91e-286 | 85.9% |
| 433 | CP066798 | Burkholderia plantarii strain KACC 18964 chromosome 1, complete sequence | 632 | 49.9% | 547.597 | 1.51e-150 | 85.9% |
| 434 | AY987924 | Burkholderia dolosa strain LMG 18942 GyrB (gyrB) gene, partial cds | 635 | 50.2% | 545.614 | 5.99e-150 | 85.9% |
| 435 | CP086006 | Burkholderia dolosa strain FDAARGOS_1545 chromosome 1 | 635 | 50.2% | 545.614 | 5.99e-150 | 85.9% |
| 436 | CP009795 | Burkholderia dolosa AU0158 chromosome 1, complete sequence | 635 | 50.2% | 545.614 | 5.99e-150 | 85.9% |
| 437 | CP082882 | Burkholderia dolosa strain FDAARGOS_1463 chromosome 1, complete sequence | 635 | 50.2% | 545.614 | 5.99e-150 | 85.9% |
| 438 | CP085967 | Burkholderia dolosa strain FDAARGOS_1544 chromosome 1, complete sequence | 635 | 50.2% | 545.614 | 5.99e-150 | 85.9% |
| 439 | AY987923 | Burkholderia dolosa strain LMG 18941 GyrB (gyrB) gene, partial cds | 635 | 50.2% | 545.614 | 5.99e-150 | 85.9% |
| 440 | CP033840 | Burkholderia dolosa strain FDAARGOS_562 chromosome 3, complete sequence | 635 | 50.2% | 545.614 | 5.99e-150 | 85.9% |
| 441 | CP069482 | Burkholderia dolosa strain FDAARGOS_1272 chromosome 1, complete sequence | 635 | 50.2% | 545.614 | 5.99e-150 | 85.9% |
| 442 | LR594689 | Variovorax sp. WDL1 genome assembly, chromosome: 1 | 1265 | 99.9% | 1142.7676999999999 | 0.00e+00 | 85.8% |
| 443 | CP171842 | Limnohabitans sp. DCL3 chromosome, complete genome | 1265 | 99.9% | 1076.86 | 0.00e+00 | 85.8% |
| 444 | CP170545 | Roseateles sp. UC29_93 chromosome, complete genome | 1084 | 85.6% | 920.7539999999999 | 7.06e-263 | 85.8% |
| 445 | AB021438 | Bacterium rM4 gyrB gene for subunit B protein of DNA gyrase, partial cds | 721 | 57.0% | 613.011 | 3.08e-170 | 85.8% |
| 446 | AB020267 | Delftia acidovorans gyrB gene for DNA gyrase subunit B, partial cds, strain: JCM6220 | 687 | 54.3% | 585.26 | 6.96e-162 | 85.8% |
| 447 | CP113068 | Roseateles sp. SL47 chromosome | 1040 | 82.1% | 953.4534 | 1.01e-272 | 85.8% |
| 448 | LR594666 | Variovorax sp. SRS16 genome assembly, chromosome: 1 | 1265 | 99.9% | 1126.9049 | 0.00e+00 | 85.7% |
| 449 | CP092462 | Comamonas sp. B21-038 chromosome | 1200 | 94.8% | 1081.3168 | 0.00e+00 | 85.7% |
| 450 | GU591797 | Sphaerotilus hippei strain 566 DNA gyrase subunit B (gyrB) gene, partial cds | 1072 | 84.7% | 900.931 | 6.55e-257 | 85.7% |
| 451 | CP087964 | Polaromonas sp. P1(28)-8 chromosome, complete genome | 774 | 61.1% | 642.745 | 3.45e-179 | 85.7% |
| 452 | CP013136 | Herbaspirillum seropedicae strain AU14040 chromosome, complete genome | 1046 | 82.6% | 983.1894 | 1.13e-281 | 85.7% |
| 453 | CP036282 | Rhodoferax aquaticus strain Gr-4 chromosome, complete genome | 705 | 55.7% | 597.153 | 1.83e-165 | 85.7% |
| 454 | CP087966 | Polaromonas sp. P1-6 chromosome, complete genome | 691 | 54.6% | 573.366 | 2.65e-158 | 85.7% |
| 455 | LR594675 | Variovorax sp. PBS-H4 genome assembly, chromosome: 1 | 1265 | 99.9% | 1053.07 | 0.00e+00 | 85.6% |
| 456 | KP432875 | Uncultured bacterium clone contig138798 genomic sequence | 943 | 74.5% | 791.415 | 0.00e+00 | 85.6% |
| 457 | CP173677 | Brachymonas sp. G13 chromosome, complete genome | 1265 | 99.9% | 1049.11 | 0.00e+00 | 85.5% |
| 458 | AP012320 | Rubrivivax gelatinosus IL144 DNA, complete genome | 1148 | 90.7% | 1010.4484 | 7.05e-290 | 85.5% |
| 459 | CP087965 | Polaromonas sp. P2-4 chromosome, complete genome | 703 | 55.5% | 573.366 | 2.65e-158 | 85.5% |
| 460 | CP011409 | Herbaspirillum hiltneri N3, complete genome | 674 | 53.2% | 559.49 | 3.98e-154 | 85.5% |
| 461 | CP111109 | Comamonadaceae bacterium AAW chromosome, complete genome | 1195 | 94.4% | 981.712 | 0.00e+00 | 85.4% |
| 462 | AB021433 | Bacterium rJ13 gyrB gene for subunit B protein of DNA gyrase, partial cds | 724 | 57.2% | 595.171 | 7.23e-165 | 85.4% |
| 463 | CP136921 | Diaphorobacter limosus strain Y-1 chromosome, complete genome | 1265 | 99.9% | 1025.32 | 0.00e+00 | 85.3% |
| 464 | AP019749 | Comamonas terrigena NBRC 13299 DNA, complete genome | 1265 | 99.9% | 1021.36 | 0.00e+00 | 85.3% |
| 465 | CP136336 | Piscinibacter gummiphilus strain SBD 7-3 chromosome, complete genome | 1142 | 90.2% | 924.719 | 4.52e-264 | 85.3% |
| 466 | AP029222 | Beta proteobacterium INBF003 DNA, complete genome | 1265 | 99.9% | 1021.36 | 0.00e+00 | 85.2% |
| 467 | CP083451 | Comamonas odontotermitis strain WLL chromosome, complete genome | 1265 | 99.9% | 1013.43 | 0.00e+00 | 85.2% |
| 468 | CP035708 | Sphaerotilus sulfidivorans strain D-507 chromosome, complete genome | 1140 | 90.0% | 914.807 | 4.36e-261 | 85.2% |
| 469 | GU734704 | Sphaerotilus natans subsp. sulfidovorans strain D-507 DNA gyrase subunit B (gyrB) gene, partial cds | 1131 | 89.3% | 904.896 | 4.19e-258 | 85.2% |
| 470 | AM490563 | Herbaspirillum seropedicae gyrB gene for DNA gyrase subunit B, type II topoisomerase, ATPase activity, protein | 1046 | 82.6% | 833.535 | 1.27e-236 | 85.2% |
| 471 | CP035503 | Rhodoferax sediminis strain CHu59-6-5 chromosome, complete genome | 1135 | 89.7% | 964.8563 | 3.74e-276 | 85.2% |
| 472 | LR594659 | Variovorax sp. PBL-H6 genome assembly, chromosome: 1 | 1265 | 99.9% | 1071.4077 | 3.13e-308 | 85.1% |
| 473 | CP171843 | Limnohabitans sp. yimb22184 chromosome, complete genome | 1265 | 99.9% | 1005.5 | 0.00e+00 | 85.1% |
| 474 | CP042344 | Comamonas flocculans strain NLF-7-7 chromosome, complete genome | 1190 | 94.0% | 948.014 | 0.00e+00 | 85.1% |
| 475 | CP011514 | Mitsuaria sp. 7, complete genome | 1084 | 85.6% | 865.251 | 3.60e-246 | 85.1% |
| 476 | CP046023 | Polaromonas sp. Pch-P chromosome, complete genome | 1187 | 93.8% | 956.9267 | 9.12e-274 | 85.1% |
| 477 | CP031013 | Polaromonas sp. SP1 chromosome, complete genome | 1187 | 93.8% | 956.9267 | 9.12e-274 | 85.1% |
| 478 | FJ032203 | Sphaerotilus natans subsp. natans strain DSM 6575 DNA gyrase subunit B (gyrB) gene, partial cds | 1083 | 85.5% | 857.3219999999999 | 8.79e-244 | 85.1% |
| 479 | CP031395 | Hylemonella gracilis strain NS1 chromosome | 1002 | 79.1% | 789.433 | 0.00e+00 | 85.0% |
| 480 | CP088297 | Aquabacterium sp. J223 chromosome | 1141 | 90.1% | 894.9839999999999 | 4.04e-255 | 85.0% |
| 481 | CP021652 | Ralstonia solanacearum strain RS 488, complete sequence | 904 | 71.4% | 758.2090000000001 | 6.02e-214 | 85.0% |
| 482 | CP011774 | Limnohabitans sp. 63ED37-2 chromosome, complete genome | 1265 | 99.9% | 989.641 | 0.00e+00 | 84.9% |
| 483 | CP014517 | Variovorax sp. PAMC 28711 chromosome, complete genome | 1265 | 99.9% | 989.641 | 0.00e+00 | 84.9% |
| 484 | LR594671 | Variovorax sp. PBL-E5 genome assembly, chromosome: 1 | 1265 | 99.9% | 989.641 | 0.00e+00 | 84.9% |
| 485 | AP029226 | Beta proteobacterium TEGF005 DNA, complete genome | 1265 | 99.9% | 981.712 | 0.00e+00 | 84.9% |
| 486 | CP000542 | Verminephrobacter eiseniae EF01-2, complete genome | 1196 | 94.5% | 928.191 | 0.00e+00 | 84.9% |
| 487 | CP171806 | Caldimonas aquatica strain HS-12-14 chromosome, complete genome | 1145 | 90.4% | 894.9839999999999 | 4.04e-255 | 84.9% |
| 488 | CP015698 | Curvibacter sp. AEP1-3 chromosome, complete sequence | 1195 | 94.4% | 910.351 | 0.00e+00 | 84.8% |
| 489 | CP039252 | Hydrogenophaga sp. PAMC20947 chromosome, complete genome | 1265 | 99.9% | 969.819 | 0.00e+00 | 84.7% |
| 490 | CP097636 | Aquincola tertiaricarbonis strain RN12 chromosome 2, complete sequence | 1149 | 90.8% | 887.5474 | 7.00e-253 | 84.7% |
| 491 | CP013729 | Roseateles depolymerans strain KCTC 42856 chromosome, complete genome | 1106 | 87.4% | 837.499 | 8.15e-238 | 84.6% |
| 492 | CP058554 | Comamonas piscis strain BIGb0172 chromosome | 1194 | 94.3% | 884.581 | 0.00e+00 | 84.4% |
| 493 | CP048836 | Nitrogeniibacter mangrovi strain M9-3-2 chromosome, complete genome | 1079 | 85.2% | 772.084 | 4.01e-218 | 84.2% |
| 494 | CP012073 | Ottowia sp. oral taxon 894 strain W10237, complete genome | 1262 | 99.7% | 880.617 | 0.00e+00 | 83.9% |
| 495 | CP182288 | Roseateles sp. So40a chromosome, complete genome | 1083 | 85.5% | 760.1909999999999 | 1.52e-214 | 83.9% |
| 496 | AP014569 | Serpentinomonas mccroryi DNA, complete genome | 1203 | 95.0% | 831.06 | 0.00e+00 | 83.8% |
| 497 | CP152376 | Rhodoferax sp. GW822-FHT02A01 chromosome, complete genome | 1196 | 94.5% | 785.468 | 0.00e+00 | 83.5% |
| 498 | CP097870 | Thauera sp. GDN1 chromosome, complete genome | 870 | 68.7% | 531.739 | 9.00e-146 | 82.8% |
| 499 | CP141259 | Aromatoleum evansii strain MAY27 chromosome, complete genome | 1138 | 89.9% | 593.189 | 2.86e-164 | 81.8% |
| 500 | CP001281 | Thauera sp. MZ1T, complete genome | 1194 | 94.3% | 577.331 | 1.70e-159 | 81.3% |
Selected alignment
Selected taxonomy
| Kingdom | |
|---|---|
| Phylum | |
| Class | |
| Order | |
| Family | |
| Genus | |
| Species |
The boxplot above shows the distribution of BLAST hits identity within each genus. Each data point shows the alignment identity between the query sequence and reference sequence. The analyst may wish to refer to this figure when making a subjective genus-level identification for the sample.
This sections shows the taxa of interest (TOI) specified by the sample submitter. Each of these taxa has been cross-referenced against the candidate species to determine if they might match the taxonomic identity of the sample. A blank row indicates a TOI that did not match any candidate species, meaning that it is unlikely that the sample matches that TOI.
This analysis evaluates how many independent sources have contributed to reference sequences for each candidate species. This provides a measure of confidence in the taxonomic annotation of references sequences. A sequence that has been annotated by multiple independent sources is more likely to have a correct taxonomic annotation.
No candidate species to report on.
This section provides a phylogeny of the candidate reference sequences. The analyst can use this to make a subjective observation on how well the reference sequences are able to distinguish between species. If the phylogeny shows distinct clades for each species, we can be confident that the molecular data are capable of distinguishing between those species. However, if the phylogeny shows overlap between species, this reduces the capacity of the molecular data to confidently distinguish between those species. In some cases, we may see the query sequence falling outside of the adjacent species' clades, which indicates that our query species is not represented in the reference database, which could indicate a rare or novel species.
The following resources can be used to ensure that the given taxonomy is legitimate and current.
| Taxa | Database |
|---|---|
| General | GBIF |
| General | ITIS |
| Mealybugs & scale | ScaleNet database |
| Thrips | Thripswiki |
| Spider Mites | Spider Mites Database |
| Psocodea (Barklice, Booklice, and Parasitic Lice) | Psocodea Species File Online |
| Orthoptera | Orthoptera Species File Online |
| Drosophilidae | TaxoDros |
| Diptera |
Catalog of the Diptera of the Australasian and Oceanian Regions
Systema Dipterorum |
| Aphids | Aphid Species File |
| Ants |
AntWeb
AntCat |
| Lepidoptera (butterflies and moths) | The Global Lepidoptera Names Index |
| Gracillariidae (primitive moths) | Global Taxonomic Database of Gracillariidae |
| Pyralidae (pyralid moths) | Global Information System on Pyraloidea |
| Tortricidae (tortrix moths) | Tortricidae Resources on the Net |